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Citations in AI, Biological Shape Analysis, and related reading

"The role of morphometry in this discussion was underscored most recently, when the international journal, Complexity (1995), posed a similarly challenging question of creating such an expanded morphometric "Book of Life" in their editorial article (John L. Casti, 1995 V. 1, pp. 5-8), "If
D'Arcy had only had a computer?"

Artificial Intelligence

  1. Noever, D. A., S. Baskaran, and P. Schuster, "Harvesting strategies for the excursion mediated genetic algorithm", 1994, Physica D: Nonlinear Physics, 35, 355
  2. Noever, D. A., and S. Baskaran, "Steady-State vs. Generational Genetic Algorithms: A Comparison of Time Complexity and Convergence Properties," in Santa Fe Institute Working Papers, No. 92-07-032, pp. 1-33 (1992).
  3. Baskaran, S. and D. A. Noever, "Excursion Sets and a Modified Genetic Algorithm: Intelligent Slicing of the Hypercube," in 1992 Lectures in Complex Systems, eds., L. Nadel & D. Stein, Vol. V, Addison-Wesley (1993).
  4. Noever, D. A., Pusey, M.L. Forsythe, E. Baskaran, S., "Artificial Neural Network Prediction of Tetragonal Lysozyme Face Growth Rates", 1996, J. Crystal Growth, 167, 220
  5. Noever, D.A. H. Matsos, A. Brittain, D. Obenhuber, Subbiah Baskaran, "The effects of variable biome distribution on global climate," Biosystems, 26, 2-7 (1996).

Biological Shape Analysis

  1. Noever, D. A., "De Novo Design of Human Immunodeficiency Virus Protease-Inhibitor Complexes," NASA Technology Transfer 2004 Symposium, Washington, D.C., November 1994.
  2. Noever, David A., Matsos, Helen C., Brittain Andrew, Obenhuber, Donald, Cronise, Raymond and Armstrong, Shannon,"Microbial Diffraction Gratings as Optical Detectors", Review of Scientific Instruments, 67,2 (1996).
  3. Noever, D. A. and S. Baskaran, "An Optimized Solution Arising from Experiments in X-Ray Crystallography of Proteins: Preliminary Findings on Computation," American Crystallographic Association Meeting, Atlanta, GA, June 18, 1994.
  4. Noever, D. A. and H. C. Matsos, "Bioassay for Cadmium Water Contamination Using Macroscopic Protozoan Patterns," Biotechnology for the 1990s: Genes, Dreams, Schemes, and Machines, San Francisco, CA, October 23-25, 1990.
  5. Noever, D. A., "Bioconvective Patterns, Synchrony, and Survival," Phys. Res. Lett., 65(15), 1953-1956 (1990).
  6. Noever, D. A., "Fractal Dimension of Bioconvective Patterns," J. of the Phys. Soc. of Japan, 59(10), 3419-3422 (1990).
  7. Noever, D. A., "Statistics of Contractive Cracking Patterns," Canadian J. Phys., 69(11), 1338-1341 (1991).
  8. Noever, D. A. and H. C. Matsos, "A Bioassay for Monitoring Cadmium Based on Bioconvective Patterns," J. Environ. Sci. Health, 26(2), 273-286 (1991).
  9. Noever, D. A. and H. Matsos, "Calcium Protection from Cadmium Poisoning: Bioconvective Indicators in Tetrahymena," J. Environ. Sci. & Health, A26(7), 1105-1113 (1991).
  10. Noever, D. A., "Fractal Dynamics of Bioconvective Patterns," J. Phys. Soc. Japan, 60(10), 3573-3578 (1991)..
  11. Noever, D. A. and H. C. Matsos, "A Biosensor for Cadmium Based on Bioconvective Patterns," NASA TM-103523, November 1990.
  12. Noever, D. A., "Evolution of Bioconvective Patterns in Variable Gravity," Phys. Rev. A, 44(8), 5279-5291 (1991).
  13. Noever, D. A., "A Rotating Spectrometer for Separation/Concentration of Bioconvecting Microorganisms," Rev. Sci. Instrum., 62(1), 229-232 (1991).
  14. Noever, D. A., "Scaling Laws for Buckling Instability in Monolayer Networks," Phys. Rev. Lett., 69(9), 1473-1474 (1992).
  15. Noever, D. A., "Statistics of Emulsion Lattices," Colloids & Surfaces, 62, 243-247 (1992).
  16. Noever, D. A., H. C. Matsos, and L. L. Looger, "Bioconvective Indicators in Tetrahymena: Nickel and Copper Protection from Cadmium Poisoning," J. Environ. Sci. & Health, A27(2), 403-417 (1992).
  17. Noever, D. A., "Statistical Crystallographic Investigation of Stability in Membrane Networks," J. Coll. & Interface Sci., 152(1), 22-32 (1992).
  18. Noever, D. A. "Statistical Crystallography of Surface Micelle Spacing," Langmuir, 8(4), 1036-1038 (1992).
  19. Noever, D. A., "Statistics of Expanding Gel Surface Patterns," J. Macromol. Sci.-Phys., B31(3), 357-364 (1992).
  20. Noever, D. A., "Size Effects in Models for Mechanically-Stressed Protein Crystals and Aggregates," J. Crys. Growth,122, 120-135 (1992).
  21. Noever, D. A., "Stability Limits for Bioconvective Fractals: Microgravity Prospects," Microgravity Science & Technology, 5(1), 50-55 (1992).
  22. Noever, D. A., "Gibbs' Overshoot on a Fractal," Physica A, 199, 341-349 (1993).
  23. Nikora, V. I., V. B. Sapozhnikv, and D. A. Noever, "Fractal Geometry of Individual River Channels and Its Computer Simulation," Water Resources, 29(10), 3561-3568 (1993).
  24. Nikora, V. I., O. I. Nikora, D. A. Noever, and G. M. Smart, "New Method of Structural Functions for Analysing Fractal Scaling Properties of Natural Processes," J. Phys. A: Math. Gen., 27, L403-L409 (1994).
  25. Noever, D. A., H. C. Matsos, R. J. Cronise, L. L. Looger, R. A. Relwani, and J. U. Johnson, "Computerized in vitro Test for Chemical Toxicity Based on Tetrahymena Swimming Patterns," Chemosphere, 29(6), 1373-1384 (1994).
  26. Noever, D. A., H. C. Matsos, L. L. Looger, M. M. Jones, and P. K. Singh, "Organic Chelation of Cadmium Using DI-PDMS: A Bioconvective Test for Protective Effects," J. Environ. Health & Sci., A29(7), 1283-1293 (1994).
  27. Noever, D. A., H. C. Matsos, R. J. Cronise, L. L. Looger, R. A. Relwani, and V. I. Nikora, "Ocean-Atmosphere CO2 Exchange: An Accessible Lab Simulation for Considering Biological Effects," Climatic Change, 27, 299-320 (1994).
  28. Noever, D. and R. Cronise, "Is Bioluminescent Turbulence an Example of Self-Organized Criticality?" Phys. Lett. A, 189, 176-180 (1994).

Additional on-line links to: http://ro.com/~cybchemx/new.html

Other reading from the proposal

  1. M. Ciaramella et al, Molecular biology of extremophiles, World Journal of Microbiology and Biotechnology, Vol 11, pp 71-84, 1995
  2. Danson et al., Archaebacteria, Biochemistry and Biotechnology, London: Biochemical Society, 1992
  3. Brown, J.W. et al, Gene Structure, Organisation and Expression in Archaebacteria. CRC Critical Reviews in Microbiology, Vol 16, No. 4, 1989
  4. DeLong, E. F., K. Y. Wu, B. B. Prezelin and R. V. M. Jovine. 1994. High abundance of Archaea in Antarctic marine picoplankton. Nature, 371: 695-697.
  5. The Biosphere Below, Daniel Grossman and Seth Shulman, Earth, 6/95.
  6. Brave New Biosphere, David Tenenbaum, The World & I, pp. 178-83, 10/95.
  7. Carnivorous Sponges, J. Vacalet et al, Nature, 1/26/95, pp. 333-5.
  8. Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii, Carol Bult et al, Science, 273: 1058-1073, 1996, see also p. 1043.
  9. Death and the Microbe, Lori Oliwenstein, pp. 98-103, Discover, 9/95.
  10. Flyspeck on a Lobster's Lip Turns Biology on its Ear, Natalie Angier, The New York Times, 12/14/95, p. A1.
  11. High abundance of Archaea in Antarctic marine picoplankton, DeLong, E. F., et al. Nature, 371: 695-697, 1994.
  12. The Illustrated Five Kingdoms: a guide to the diversity of life on Earth / Lynn Margulis et al, New York: HarperCollins, 1994.
  13. Life at High Temperatures, Thomas D. Brock, Yellowstone Association for Natural Science, Yellowstone National Park, 1994.
  14. Life at the Sea Floor, Holger Jannasch, Nature, 4/20/95, pp. 676-7.
  15. Marine Biodiversity: two special issues, Oceanus, Fall/Winter 1995, and Spring/Summer 1996, Woods Hole Oceanographic Institution, Woods Hole, Mass.
  16. Microbial Life in Hyperthermal Environments, Karl Stetter, ASM News, 61:6, pp. 285-90, 1995.
  17. The Outer Reaches of Life, John R. Postgate, Cambridge University Press, 1994.
  18. Scientists Close in on Hidden Lair of the Ocean's Fabled Giant Squid, William Broad, The New York Times, 2/13/96, p. C1.
  19. Scientists Discover a Clue to the Origin of Life in a Microbe Rather Than a Myth, Nicholas Wade, The New York Times, 8/23/96.
  20. Sorcerers of the Sea: Making Microbes Do the Dirty Work, Elizabeth Pennisi, Bioscience, 46:4, pp. 236-9, 4/96.
  21. Studies of the Symbiotic Relationship Between Animals and Microorganisms, Margaret McFall-Ngai, Science Spectra, 1(4): 14-19.
  22. Tumbleweeds of the Sea, Cheryl Dybas, Sea Frontiers, pp. 20-21.